Category "networkx"

How can I calculate the number of geodesics (shortest paths) going through a vertex or an edge in networkx?

The betweeness function in igraph of R defines the edge betweeness as the the number of geodesics (shortest paths) going through. However, the edge_betweenness_

How to ensure the training set is connected during train-test split?

I am doing research in link prediction on social network. I divided my data set into train and test set for each experiment using python and networkx as shown b

Degeneracy given a graph

An exercise requires to determine the degenerative level of a graph. To do that, I have found useful the following code (source: https://www.geeksforgeeks.org/f

How can i get the the two nodes (coordinates) between a edge? In OSMNX if i had (u,v,x) by ox.distance.nearest_edges

I have the id's of an edge and I want to get the coordinates(x,y) of the nodes inside it, I try this way: #this is my graph: G = ox.graph_from_address('Arequipa

Graph2Vec fit method by karateclub

I am struggling with running the graph2vec module by karateclub (or any other provider of a similar one) on my networkx Graph G. Graph2Vec was introduced in thi

How do I calculate the global efficiency of graph in igraph (python)?

I am trying to calculate the global efficiency of a graph in igraph but I am not sure if I using the module correctly. I think there is a solution that might ma

How to add new edges to the stellargraph dataset?

I need to add some extra edges to Cora dataset using stellargraph. Is there ane way to add edges to the current dataset in stellargraph library? import stellarg

Error 'power iteration failed to converge within 100 iterations') when I tried to summarize a text document using python networkx

I got an PowerIterationFailedConvergence:(PowerIterationFailedConvergence(...), 'power iteration failed to converge within 100 iterations') when I tried to summ

Two nodes less than 1 mile apart on the same road fail to work in osmnx.shortest_path_length

I have successfully used osmnx.shortest_path_length to calculate many distances but these two nodes return : NetworkXNoPath: Node 9473072437 not reachable from

Is there any way to create the shortest path going through multiple (more than 2) different points using OSMNX?

I was wondering if there was a way to get the shortest path between an origin and a target, but with the path going through different points defined along the w

AttributeError: module 'networkx' has no attribute 'connected_component_subgraphs'

B = nx.Graph() B.add_nodes_from(data['movie'].unique(), bipartite=0, label='movie') B.add_nodes_from(data['actor'].unique(), bipartite=1, label='actor') B.add_e

Finding the girth of a graph with networkx

Does NetworkX have a method or function that I can use to figure the girth of a graph? For context, I'm trying to verify that a Mycielskian graph that I'm const

Python-AttributeError: 'int' object has no attribute 'decode'" when trying to call the GML file on NetworkX

Premise・What I want to achieve I'm going to use Python to read the GML file. Error Message Traceback (most recent call last): File "firstgml.py", line

NetworkX - Setting node attributes from dataframe

I'm having trouble figuring out how to add attributes to nodes in my network from columns in my dataframe. I have provided an example of my dataframe below, t

Using cosine distance of Laplacian spectrums as similarity between graphs

The current similarity functions on networkx didn't work fastenough for me and I couldn't make graphsim to work either. So, I was naively thinking to use inner

How to save a 'pos dictionary' type of object? (NetworkX)

I am using the networkx as nx. After creating a graph object (G), I use the data = nx.spring_layout(G) method to generate a dictionary (pos). Generating this po

What is the fastest way to add a lot of nodes/edges to a NetworkX graph programmatically?

I need to quickly create a large NetworkX Graph, with data coming from a query against some database, returning a lot of data. I gear adding nodes and edges one

How to avoid overlapping when there's hundreds of nodes in networkx?

I've got 2000+ nodes and 900+ edges, but when I was trying to make graphics in networkx, I found all the nodes crowded together. I tried changing attribute valu

NetworkX multigraph plot does not show labels

I am trying to plot a knowledge graph using Python, have looked at many examples and answers, but still did not manage to plot the edge labels automatically fro

How to properly plot a tree (27k nodes) using a circular tree / leave layout

I have this (unbalanced) tree with 27k+ nodes. It is an hierachy. Now I would to plot it as such to obtain a plot something like this (no idea how you would des