Category "nifti"

Getting the intensities of a certain region of an MR image

I have a 3D MR image as a NIfTI file (.nii.gz). I also have a 'mask' image as a NIfTI file, which is just a bunch of 0s and 1s. The 1s in this mask image repres

Memmap AttributeError when trying to access nifti image header

After loading a NIFTI (.nii) image (using Nibabel) with the code scan = nibabel.load(filepath), it is useful to display the image header information via scan.he

Correlation heatmap of many datasets

I am working with niftis (Neuroimaging format) looking at 3D volumes of the brain. I want to compare experiments with brain activity. Therefore I have about 2