'R Mann-Whitney-U test output like in SPSS
I want to run Mann-Whitney-U test. But R's wilcox.test(x~y, conf.int=TRUE)
does not give such statistics as N, Mean Rank, Sum of Ranks, Z-value for both factors. I need R to give as much information as SPSS does (see here)
I'm wondering whether I didn't select some options, or if there is a good package I could install?
Thanks!
Solution 1:[1]
In R, you need to calculate the various outputs of SPSS separately. For example, using dplyr::summarise
:
library(dplyr)
mt_filt <- mtcars %>%
filter(cyl > 4) %>%
mutate(rank_mpg = rank(mpg))
mt_filt %>%
group_by(cyl) %>%
summarise(n = n(),
mean_rank_mpg = mean(rank_mpg),
sum_rank_mpg = sum(rank_mpg))
# # A tibble: 2 × 4
# cyl n mean_rank_mpg sum_rank_mpg
# <dbl> <int> <dbl> <dbl>
# 1 6 7 17.4 122
# 2 8 14 7.82 110
# Number in first group
n1 <- sum(as.integer(factor(mt_filt$cyl)) == 1)
wilcox.test(mpg ~ cyl, mt_filt) %>%
with(data_frame(U = statistic,
W = statistic + n1 * (n1 + 1) / 2,
Z = qnorm(p.value / 2),
p = p.value))
# # A tibble: 1 × 4
# U W Z p
# <dbl> <dbl> <dbl> <dbl>
# 1 93.5 121.5 -3.286879 0.001013045
Edit 2020-07-15
Thanks to @Paul for pointing out that the ranks need to be generated prior to grouping.
Sources
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Source: Stack Overflow
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