'IO backend error in the xarray for netcdf file
I am trying to open a .netcdf file using xarray and it is showing this error. I am unable to resolve this error and I have found no such solution to resolve this error. I have tried with different versions of Anaconda and Ubuntu but the problem persists.
ValueError: did not find a match in any of xarray's currently installed IO backends ['scipy']. Consider explicitly selecting one of the installed backends via the
engine
parameter to xarray.open_dataset(), or installing additional IO dependencies: http://xarray.pydata.org/en/stable/getting-started-guide/installing.html http://xarray.pydata.org/en/stable/user-guide/io.html
Solution 1:[1]
Based on your error message, it looks like you are only missing the scipy
dependency.
I would recommend installing using conda install
in either your terminal/command line or in Jupyter (if you use that IDE):
conda install scipy
If you are using a Python environment other than your base environment, ensure you are installing to the environment are using for the project by navigating there in terminal, or by running the kernel on that environment in Jupyter.
You may need to restart the kernel if you are using Jupyter for the change to take effect.
Solution 2:[2]
I had the same issue. I then installed netCDF4 via:
pip install netCDF4
and xarray worked. Beware of dependencies!!
Solution 3:[3]
I had the same problem as well. In this matter, you need to install IO dependencies. Based on their web site here you need to install all IO related packages:
io = netCDF4, h5netcdf, scipy, pydap, zarr, fsspec, cftime, rasterio, cfgrib, pooch
conda install -c anaconda netcdf4 h5netcdf scipy pydap zarr fsspec cftime rasterio cfgrib pooch
Solution 4:[4]
conda install scipy
solves the problem
Solution 5:[5]
Thanks Wilson and Water77. In my case, I was installing all the packages in my root environment but I realized I should make a different python environment to install all the packages and it worked for me.
Solution 6:[6]
I know installing the dependencies is the first move. However, I wanted to point out, that I ran into this issue due to a corrupt netCDF file!
Sources
This article follows the attribution requirements of Stack Overflow and is licensed under CC BY-SA 3.0.
Source: Stack Overflow
Solution | Source |
---|---|
Solution 1 | |
Solution 2 | Bart |
Solution 3 | |
Solution 4 | Rituparna |
Solution 5 | saurabh rathore |
Solution 6 | rtom |