'NetCDF re-ordering dimension
I have 1 netCDF file with a variable ppt
and three dimension ppt(time,lat,lon)
. See below:
dimensions:
time = UNLIMITED ; // (756 currently)
lon = 55 ;
lat = 60 ;
variables:
double time(time) ;
time:standard_name = "time" ;
time:long_name = "time" ;
time:units = "days since 1900-01-01 00:00:00" ;
time:calendar = "gregorian" ;
time:axis = "T" ;
double lon(lon) ;
lon:standard_name = "longitude" ;
lon:long_name = "longitude" ;
lon:units = "degrees_east" ;
lon:axis = "X" ;
double lat(lat) ;
lat:standard_name = "latitude" ;
lat:long_name = "latitude" ;
lat:units = "degrees_north" ;
lat:axis = "Y" ;
int ppt(time, lat, lon) ;
ppt:standard_name = "precipitation_amount" ;
ppt:long_name = "precipitation_amount" ;
ppt:units = "mm" ;
ppt:add_offset = 0. ;
ppt:scale_factor = 0.1 ;
ppt:_FillValue = -2147483648 ;
ppt:missing_value = -2147483648 ;
ppt:description = "Accumulated Precipitation" ;
ppt:dimensions = "lon lat time" ;
ppt:coordinate_system = "WGS84,EPSG:4326" ;
I would like re-order the dimension from time,lat,lon
to lat,lon,time
.
I use command: ncpdq -a lat,lon,time in.nc out.nc
After re-ordering the variables, the lat
dimension becomes UNLIMITED
which is wrong. The time
dimension should be the UNLIMITED
dimension.
dimensions:
time = 756 ;
lon = 55 ;
lat = UNLIMITED ; // (60 currently)
...
...
int ppt(lat, lon, time) ;
Then I tried to fix the lat
dimension who becomes UNLIMITED
using ncks
command below:
ncks --fix_rec_dmn lat out.nc out1.nc
It's worked, see below:
dimensions:
lat = 60 ;
lon = 55 ;
time = 756 ;
Now I would like to make UNLIMITED the time dimension again using ncks command below:
ncks --fix_rec_dmn time out1.nc out2.nc
Unfortunately nothing happen, the result remain same. See below:
dimensions:
lat = 60 ;
lon = 55 ;
time = 756 ;
My question, how to make UNLIMITED the time dimension again?
Solution 1:[1]
I found similar problem and answer from https://stackoverflow.com/a/55883675/10874805
My mistake, to make UNLIMITED the time dimension, I must use --mk_rec_dmn
instead of --fix_rec_dmn
So the code should be: ncks --mk_rec_dmn time out1.nc out2.nc
Solution 2:[2]
In netCDF3 files, variables can only have the unlimited dimension, if any, as their first dimension. netCDF4 relaxes this restriction, so if you want the record dimension in a position other than the most rapidly varying dimension, you must ensure the output is a netCDF4 file.
Sources
This article follows the attribution requirements of Stack Overflow and is licensed under CC BY-SA 3.0.
Source: Stack Overflow
Solution | Source |
---|---|
Solution 1 | |
Solution 2 | Charlie Zender |